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Ligand · 5SY

5SY · [(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2-methoxy-5-oxidanyl-4-[(2-oxidanylidenechromen-3-yl)methoxy]oxan-3-yl] ethanoate

5SY, [(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2-methoxy-5-oxidanyl-4-[(2-oxidanylidenechromen-3-yl)methoxy]oxan-3-yl] ethanoate (C19 H22 O9, 394.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry).…

Component
5SY
Formula
C19 H22 O9
Class
ligand
Structures
2
PDB entries
1

Binding sites

5SY in 2 structures; the first of them:

  • 5EXO · Crystal structure of Human galectin-3 CRD in complex with methyl… · 5SY A302 · binds ARG144, HIS158, ASN160, ARG162, VAL172, ASN174, TRP181, GLU184
  • 5EXO · Crystal structure of human galectin-3 crd in complex with methyl 2-O… · 5SY A302 · binds ARG144, HIS158, ASN160, ARG162, VAL172, ASN174, TRP181, GLU184

Residues it binds most

ARG 2, ASN 2, GLU 2, HIS 2, TRP 2, VAL 2 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion

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