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Ligand · 5PA

5PA · N-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-Y-lmethyl]-1-amino-cyclopropanecarboxylic acid

5PA, N-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-Y-lmethyl]-1-amino-cyclopropanecarboxylic acid (C12 H17 N2 O7 P, 332.2 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its…

Component
5PA
Formula
C12 H17 N2 O7 P
Class
ligand
Structures
8
PDB entries
4

Binding sites

5PA in 8 structures; the first of them:

  • 1D7R · Crystal structure of the complex of 2,2-dialkylglycine decarboxylase with 5PA · 5PA A500 · binds GLN52, MET53, THR110, GLY111, ALA112, ASN115, TRP138, HIS139 and 8 more
  • 1J0B · Crystal Structure Analysis of the ACC deaminase homologue complexed with inhibitor · 5PA A1011 · binds ASN53, LYS54, LYS57, GLY77, ALA78, SER81, ASN82, HIS83 and 15 more
  • 1J0D · ACC deaminase mutant complexed with ACC · 5PA A1401 · binds ASN50, LYS54, ILE73, GLY74, GLY75, SER78, ASN79, GLN80 and 17 more
  • 4D96 · D-Cysteine desulfhydrase from Salmonella typhimurium complexed with… · 5PA A501 · binds ASN50, LYS51, LYS54, GLY74, SER78, ASN79, HIS80, VAL158 and 16 more
  • 1D7R · Crystal structure of the complex of 2,2-dialkylglycine decarboxylase with 5PA · 5PA A500 · binds GLN52, MET53, THR110, GLY111, ALA112, ASN115, TRP138, HIS139 and 8 more
  • 1J0B · Crystal structure analysis of the acc deaminase homologue complexed with inhibitor · 5PA A1011 · binds ASN53, LYS54, LYS57, GLY77, ALA78, SER81, ASN82, HIS83 and 15 more

Residues it binds most

GLY 66, THR 66, SER 66, ALA 64, ASN 66, LYS 66, TYR 64, HIS 58, ASP 50, LEU 24 (residue and the binding sites it lines).

Found with

  • BEN · Benzamidine
  • K · Potassium ion
  • NA · Sodium ion
  • SO4 · Sulfate ion

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