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Ligand · 5P9

5P9 · N-(5-chloropyridin-2-yl)-3-oxo-2,3-dihydro-1H-indene-1-carboxamide

5P9, N-(5-chloropyridin-2-yl)-3-oxo-2,3-dihydro-1H-indene-1-carboxamide (C15 H11 Cl N2 O2, 286.7 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
5P9
Formula
C15 H11 Cl N2 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

5P9 in 2 structures; the first of them:

  • 7P51 · Crystal structure of the SARS-cov-2 main protease complexed with fragment F01 · 5P9 A403 · binds HIS41, MET49, TYR54, PHE140, LEU141, ASN142, SER144, CSO145 and 8 more
  • 7P51 · Crystal structure of the SARS-cov-2 main protease complexed with fragment F01 · 5P9 A403 · binds HIS41, MET49, TYR54, PHE140, LEU141, ASN142, SER144, CSO145 and 7 more

Residues it binds most

HIS 2, MET 2, ARG 2, ASN 2, ASP 2, CSO 2, GLU 2, LEU 2, PHE 2, SER 2 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • DMS · Dimethyl sulfoxide

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