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Ligand · 5NT

5NT · 2-azanyl-7-[(2~{S},3~{R},5~{S})-5-(hydroxymethyl)-3-oxidanyl-pyrrolidin-2-yl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one

5NT, 2-azanyl-7-[(2~{S},3~{R},5~{S})-5-(hydroxymethyl)-3-oxidanyl-pyrrolidin-2-yl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one (C11 H15 N5 O3, 265.3 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding…

Component
5NT
Formula
C11 H15 N5 O3
Class
ligand
Structures
1
PDB entries
1

Binding sites

5NT in 1 structure; the first of them:

  • 5EGR · tRNA guanine transglycosylase (TGT) in complex with an Immucillin derivative · 5NT A406 · binds ASN70, ASP102, SER103, TYR106, ASP156, ILE201, GLN203, GLY229 and 4 more

Residues it binds most

ASP 1, GLY 1, ASN 1, GLN 1, ILE 1, MET 1, SER 1, TYR 1 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • EDO · 1,2-ethanediol
  • GOL · Glycerol

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