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Ligand · 5ND

5ND · 5-(2-naphthylmethyl)-D-hydantoin

5ND, 5-(2-naphthylmethyl)-D-hydantoin (C14 H12 N2 O2, 240.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
5ND
Formula
C14 H12 N2 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

5ND in 2 structures; the first of them:

  • 4D1D · STRUCTURE OF MHP1, A NUCLEOBASE-CATION-SYMPORT-1 FAMILY TRANSPORTER with the inhibitor… · 5ND A1468 · binds GLN42, ALA44, ILE45, ALA48, TRP117, GLN121, ILE215, PHE216 and 6 more
  • 4D1D · Structure of MHP1, a nucleobase-cation-symport-1 family transporter with the inhibitor… · 5ND A1468 · binds GLN42, ALA44, ILE45, ALA48, TRP117, GLN121, ILE215, PHE216 and 6 more

Residues it binds most

ALA 2, GLN 2, ILE 2, TRP 2, ASN 2, GLY 2, PHE 2, THR 2, VAL 2 (residue and the binding sites it lines).

Found with

  • 5NL · 5-(2-naphthylmethyl)-L-hydantoin
  • NA · Sodium ion

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