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Ligand · 5IB

5IB · ~{N}-[2-methoxy-5-(oxidanylcarbamoyl) phenyl]dibenzofuran-4-carboxamide

5IB, ~{N}-[2-methoxy-5-(oxidanylcarbamoyl) phenyl]dibenzofuran-4-carboxamide (C21 H16 N2 O5, 376.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
5IB
Formula
C21 H16 N2 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

5IB in 2 structures; the first of them:

  • 7P3S · Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate… · 5IB A507 · binds LYS20, ASP100, HIS141, HIS142, GLY150, ASP186, HIS188, PHE216 and 5 more
  • 7P3S · Crystal structure of schistosoma mansoni HDAC8 complexed with a benzohydroxamate… · 5IB A507 · binds LYS20, ASP100, HIS141, HIS142, GLY150, ASP186, HIS188, PHE216 and 4 more

Residues it binds most

HIS 8, ASP 8, GLY 8, PHE 8, LYS 8, TYR 8, PRO 7 (residue and the binding sites it lines).

Found with

  • K · Potassium ion
  • ZN · Zinc ion
  • GOL · Glycerol

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