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Ligand · 5GS

5GS · 2'-C-methyluridine 5'-(trihydrogen diphosphate)

5GS, 2'-C-methyluridine 5'-(trihydrogen diphosphate) (C10 H16 N2 O12 P2, 418.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
5GS
Formula
C10 H16 N2 O12 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

5GS in 2 structures; the first of them:

  • 4WTF · Crystal structure of HCV NS5B genotype 2A jfh-1 isolate with S15G E86Q E87Q C223H V321I… · 5GS A605 · binds A2, A3, U6, ARG48, LYS141, ARG158, ASP220, THR221 and 10 more
  • 4WTF · Crystal structure of HCV NS5B genotype 2A jfh-1 isolate with S15G E86Q E87Q C223H V321I… · 5GS A605 · binds A2, A3, U6, ARG48, LYS141, ARG158, ASP220, THR221 and 10 more

Residues it binds most

ARG 2, ASP 2, A 2, THR 2, ASN 2, HIS 2, LYS 2, PHE 2, SER 2, U 2 (residue and the binding sites it lines).

Found with

  • MN · Manganese (II) ion
  • CL · Chloride ion

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