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Ligand · 5D4

5D4 · N-(6-acetamidohexyl)acetamide

5D4, N-(6-acetamidohexyl)acetamide (C10 H20 N2 O2, 200.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
5D4
Formula
C10 H20 N2 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

5D4 in 2 structures; the first of them:

  • 5A7C · Crystal structure of the second bromodomain of human BRD3 in complex with compound · 5D4 A500 · binds TRP332, PRO333, PHE334, VAL338, LEU343, LEU345, CYS387, ASN391 and 1 more
  • 5A7C · Crystal structure of the second bromodomain of human BRD3 in complex with compound · 5D4 A500 · binds TRP332, PRO333, PHE334, VAL338, LEU343, LEU345, CYS387, ASN391 and 1 more

Residues it binds most

LEU 8, VAL 8, ASN 8, CYS 8, PHE 8, PRO 8, TRP 8, HIS 6, GLU 4, MET 4 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol

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