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Ligand · 5CY

5CY · 1-(3-hydroxypropyl)-2-{(1E,3E,5E)-5-[1-(3-hydroxypropyl)-3,3-dimethyl-1,3-dihydro-2H-indol-2-ylidene]penta-1,3-dien-1-yl}-3,3-dimethyl-3H-indolium

5CY, 1-(3-hydroxypropyl)-2-{(1E,3E,5E)-5-[1-(3-hydroxypropyl)-3,3-dimethyl-1,3-dihydro-2H-indol-2-ylidene]penta-1,3-dien-1-yl}-3,3-dimethyl-3H-indolium (C31 H39 N2 O2 +1, 471.7 g/mol), in the MolNFT structures on GenesisL1: bound in 1…

Component
5CY
Formula
C31 H39 N2 O2 +1
Class
ligand
Structures
1
PDB entries
1

Binding sites

5CY in 1 structure; the first of them:

  • 5NS3 · Crystal structures of CY5 cyanine fluorophores stacked onto the end of double-stranded RNA · 5CY C25 · binds C26, G58

Residues it binds most

C 2, G 2 (residue and the binding sites it lines).

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