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Ligand · 5CD

5CD · 5'-chloro-5'-deoxyadenosine

5CD, 5'-chloro-5'-deoxyadenosine (C10 H12 Cl N5 O3, 285.7 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
5CD
Formula
C10 H12 Cl N5 O3
Class
ligand
Structures
3
PDB entries
2

Binding sites

5CD in 3 structures; the first of them:

  • 6RZ2 · SalL with Chloroadenosine · 5CD B301 · binds PHE186, ASN188, PHE228, LEU250, ASN251, GLN252, SER253, ASP11 and 10 more
  • 6RZ2 · Sall with chloroadenosine · 5CD B301 · binds PHE186, ASN188, PHE228, LEU250, ASN251, GLN252, SER253, ASP11 and 10 more
  • 7CCG · Crystal structure of CLA1, a kind of a chlorinase from soil bacteria · 5CD A302 · binds ASP11, PHE45, TYR70, VAL71, TYR72, PRO73, THR75, THR128 and 4 more

Residues it binds most

TYR 7, PHE 7, THR 7, ASN 6, ASP 7, GLY 7, PRO 7, TRP 7, VAL 7, GLN 6 (residue and the binding sites it lines).

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