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Ligand · 53Z

53Z · 1-(4-aminobenzyl)-3-[2-oxo-2-(pyrrolidin-1-yl)ethyl]urea

53Z, 1-(4-aminobenzyl)-3-[2-oxo-2-(pyrrolidin-1-yl)ethyl]urea (C14 H20 N4 O2, 276.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
53Z
Formula
C14 H20 N4 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

53Z in 2 structures; the first of them:

  • 4J58 · Human Cyclophilin D Complexed with an Inhibitor · 53Z A301 · binds ARG97, PHE102, MET103, GLN105, GLY114, THR115, GLY116, ARG124 and 9 more
  • 4J58 · Human cyclophilin D complexed with an inhibitor · 53Z A301 · binds ARG97, PHE102, MET103, GLN105, GLY114, THR115, GLY116, ARG124 and 9 more

Residues it binds most

GLY 2, ALA 2, ARG 2, ASN 2, GLN 2, PHE 2, THR 2, HIS 2, MET 2 (residue and the binding sites it lines).

Found with

  • PO4 · Phosphate ion

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