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Ligand · 52G

52G · Zorbamycin

52G, Zorbamycin (C55 H85 N19 O21 S2, 1412.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
52G
Formula
C55 H85 N19 O21 S2
Class
ligand
Structures
2
PDB entries
1

Binding sites

52G in 2 structures; the first of them:

  • 5CJ3 · Crystal structure of the zorbamycin binding protein (ZbmA) from Streptomyces flavoviridis… · 52G A201 · binds PRO59, ASP60, ASN61, THR62, GLN63, TRP65, TYR86, ALA87 and 17 more
  • 5CJ3 · Crystal structure of the zorbamycin binding protein (zbma) from streptomyces flavoviridis… · 52G A201 · binds PRO59, ASP60, ASN61, THR62, GLN63, TRP65, TYR86, ALA87 and 17 more

Residues it binds most

THR 4, ALA 4, ARG 4, PHE 4, ASN 4, GLU 4, TRP 4, LEU 4, PRO 4, ASP 4 (residue and the binding sites it lines).

Found with

  • CU · Copper (II) ion
  • CL · Chloride ion

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