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Ligand · 4RA

4RA · [(2R,3R,4R,5S,6R)-3-acetamido-6-methyl-5-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-4-oxidanyl-oxan-2-yl] [[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate

4RA, [(2R,3R,4R,5S,6R)-3-acetamido-6-methyl-5-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-4-oxidanyl-oxan-2-yl]…

Component
4RA
Formula
C25 H36 N5 O20 P3
Class
ligand
Structures
3
PDB entries
2

Binding sites

4RA in 3 structures; the first of them:

  • 4ZTC · PglE Aminotransferase in complex with External Aldimine, Mutant K184A · 4RA A401 · binds PHE4, SER6, PRO7, PRO8, SER55, ALA56, THR57, LEU60 and 16 more
  • 7L7X · X-ray structure of the Pcryo_0638 aminotransferase from Psychrobacter cryohalolentis · 4RA AAA502 · binds ASN58, GLY59, THR60, LEU63, THR84, PHE85, ALA87, SER88 and 23 more
  • 4ZTC · Pgle aminotransferase in complex with external aldimine, mutant K184A · 4RA A401 · binds PHE4, SER6, PRO7, PRO8, SER55, ALA56, THR57, LEU60 and 16 more

Residues it binds most

SER 4, GLY 4, ALA 4, ASN 4, THR 4, PHE 4, ARG 4, LEU 4, TRP 4, ASP 4 (residue and the binding sites it lines).

Found with

  • PMP · 4'-deoxy-4'-aminopyridoxal-5'-phosphate
  • NA · Sodium ion
  • EDO · 1,2-ethanediol
  • TMA · Tetramethylammonium ion

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