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Ligand · 48O

48O · 5'-deoxy-5'-{[(2S)-2-(triaza-1,2-dien-2-ium-1-yl)propanoyl]amino}uridine

48O, 5'-deoxy-5'-{[(2S)-2-(triaza-1,2-dien-2-ium-1-yl)propanoyl]amino}uridine (C12 H17 N6 O6 +1, 341.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
48O
Formula
C12 H17 N6 O6 +1
Class
ligand
Structures
2
PDB entries
1

Binding sites

48O in 2 structures; the first of them:

  • 4Y63 · AAGlyB in complex with amino-acid analogues · 48O A402 · binds PHE121, ALA122, ILE123, LYS124, TYR126, TRP181, VAL184, SER185 and 4 more
  • 4Y63 · Aaglyb in complex with amino-acid analogues · 48O A402 · binds PHE121, ALA122, ILE123, LYS124, TYR126, TRP181, VAL184, SER185 and 4 more

Residues it binds most

ASP 2, VAL 2, ALA 2, ARG 2, ILE 2, LYS 2, PHE 2, SER 2, TRP 2, TYR 2 (residue and the binding sites it lines).

Found with

  • BHE · octyl 2-O-(6-deoxy-alpha-L-galactopyranosyl)-beta-D-galactopyranoside
  • MN · Manganese (II) ion

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