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Ligand · 43Q

43Q · (3S)-1,3-dihydroxy-4-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}-2-methylbut-2-ylium, carbokation intermediate

43Q, (3S)-1,3-dihydroxy-4-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}-2-methylbut-2-ylium, carbokation intermediate (C5 H13 O9 P2 +1, 279.1 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding…

Component
43Q
Formula
C5 H13 O9 P2 +1
Class
ligand
Structures
6
PDB entries
3

Binding sites

43Q in 6 structures; the first of them:

  • 4S3A · IspG in complex with Intermediate I · 43Q A901 · binds PRO298, VAL345, ASN346
  • 4S3B · IspG in complex with Intermediate II · 43Q A901 · binds PRO298, VAL345, ASN346
  • 4S3C · IspG in complex with Epoxide Intermediate · 43Q A901 · binds CYS297, PRO298, CYS300, VAL345, ASN346
  • 4S3A · Ispg in complex with intermediate I · 43Q A901 · binds PRO298, VAL345, ASN346
  • 4S3B · Ispg in complex with intermediate II · 43Q A901 · binds PRO298, VAL345, ASN346
  • 4S3C · Ispg in complex with epoxide intermediate · 43Q A901 · binds CYS297, PRO298, CYS300, VAL345, ASN346

Residues it binds most

ASN 6, PRO 6, VAL 6, CYS 2 (residue and the binding sites it lines).

Found with

  • SF4 · Iron/sulfur cluster
  • GOL · Glycerol

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