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Ligand · 40C

40C · N-[(4-amino-2-oxopyrimidin-1(2H)-yl)acetyl]-N-[(2S)-2-aminopropyl]glycine

40C, N-[(4-amino-2-oxopyrimidin-1(2H)-yl)acetyl]-N-[(2S)-2-aminopropyl]glycine (C11 H17 N5 O4, 283.3 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
40C
Formula
C11 H17 N5 O4
Class
ligand
Structures
1
PDB entries
1

Binding sites

40C in 1 structure; the first of them:

  • 3PA0 · Crystal structure of chiral gamma-pna with complementary DNA strand: insight into the… · 40C C6 · binds DG5, DT6, DG7

Residues it binds most

DG 6, DT 4 (residue and the binding sites it lines).

Found with

  • 40A · N-[(2S)-2-aminopropyl]-N-[(6-amino-9H-purin-9-yl) acetyl]glycine
  • 40G · N-[(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)acetyl]-N-[(2S)-2-aminopropyl]glycine
  • 40T · N-[(2S)-2-aminopropyl]-N-[(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)acetyl]glycine
  • ZN · Zinc ion
  • EDO · 1,2-ethanediol

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