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Ligand · 3Y0

3Y0 · [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4R,5R)-3-oxidanyl-5-sulfanyl-4-tridecoxy-oxolan-2-yl]methyl hydrogen phosphate

3Y0, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4R,5R)-3-oxidanyl-5-sulfanyl-4-tridecoxy-oxolan-2-yl]methyl hydrogen phosphate (C28 H49 N5 O13 P2 S, 757.7 g/mol), in the MolNFT…

Component
3Y0
Formula
C28 H49 N5 O13 P2 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

3Y0 in 2 structures; the first of them:

  • 4X3O · Sirt2 in complex with a myristoyl peptide · 3Y0 C101 · binds GLY84, ALA85, GLY86, THR89, ASP95, PHE96, ARG97, SER98 and 30 more
  • 4X3O · SIRT2 in complex with a myristoyl peptide · 3Y0 C101 · binds GLY84, ALA85, GLY86, THR89, ASP95, PHE96, ARG97, SER98 and 30 more

Residues it binds most

PHE 2, GLY 2, LEU 2, ALA 2, ASN 2, ASP 2, GLU 2, ILE 2, LYS 2, SER 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • EDO · 1,2-ethanediol

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