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Ligand · 3V5

3V5 · (3S,5S)-3-({[(aminomethyl)amino]methyl}sulfanyl)-5-[(2S)-1,3-dioxobutan-2-yl]-L-proline

3V5, (3S,5S)-3-({[(aminomethyl)amino]methyl}sulfanyl)-5-[(2S)-1,3-dioxobutan-2-yl]-L-proline (C11 H19 N3 O4 S, 289.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues…

Component
3V5
Formula
C11 H19 N3 O4 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

3V5 in 2 structures; the first of them:

  • 4QTF · Structure and specificity of L-D-Transpeptidase from Mycobacterium tuberculosis and… · 3V5 A502 · binds MET303, TYR318, SER331, GLY332, VAL333, PHE334, HIS336, SER351 and 3 more
  • 4QTF · Structure and specificity of L-D-transpeptidase from mycobacterium tuberculosis and… · 3V5 A502 · binds MET303, TYR318, SER331, GLY332, VAL333, PHE334, HIS336, SER351 and 3 more

Residues it binds most

GLY 2, HIS 2, SER 2, CYS 2, MET 2, PHE 2, TYR 2, VAL 2 (residue and the binding sites it lines).

Found with

  • MLD · Glcnac(beta1-4)-murnac(1,6-anhydro)-L-ala-gamma-D-glu-meso-A2PM-D-ala

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