GL1X · GenesisL1 explorer

Ligand · 3RN

3RN · 2-(hydroxymethyl)cyclopent-2-en-1-one

3RN, 2-(hydroxymethyl)cyclopent-2-en-1-one (C6 H8 O2, 112.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
3RN
Formula
C6 H8 O2
Class
ligand
Structures
4
PDB entries
2

Binding sites

3RN in 4 structures; the first of them:

  • 3RND · W116I-OYE1 complexed with 2-(Hydroxymethyl)-cyclopent-2-e · 3RN A400 · binds THR37, HIS191, ASN194, TYR196, PHE250, PRO295, PHE296, TYR375
  • 3TX9 · OYE1 complexed with 2-(Hydroxymethyl)-cyclopent-2-e · 3RN A402 · binds THR37, TRP116, HIS191, ASN194, TYR196, PHE250, PRO295, PHE296 and 1 more
  • 3RND · W116I-OYE1 complexed with 2-(hydroxymethyl)-cyclopent-2-enone · 3RN A400 · binds THR37, HIS191, ASN194, TYR196, PHE250, PRO295, PHE296, TYR375
  • 3TX9 · OYE1 complexed with 2-(hydroxymethyl)-cyclopent-2-enone · 3RN A402 · binds THR37, TRP116, HIS191, ASN194, TYR196, PHE250, PRO295, PHE296 and 1 more

Residues it binds most

PHE 4, TYR 4, ASN 4, HIS 4, PRO 4, THR 4, TRP 2 (residue and the binding sites it lines).

Found with

  • FMN · Flavin mononucleotide
  • MG · Magnesium ion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.