GL1X · GenesisL1 explorer

Ligand · 3OD

3OD · (2S,3S,4R,5S)-2-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-4,5-dihydroxytetrahydrofuran-3-yl acetate

3OD, (2S,3S,4R,5S)-2-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-4,5-dihydroxytetrahydrofuran-3-yl acetate (C17 H25 N5 O15 P2…

Component
3OD
Formula
C17 H25 N5 O15 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

3OD in 2 structures; the first of them:

  • 2H59 · Sir2 H116A-deacetylated p53 peptide-3'-o-acetyl ADP ribose · 3OD B253 · binds GLY21, ALA22, GLY23, THR26, PRO27, ASP32, PHE33, ARG34 and 18 more
  • 2H59 · SIR2 H116A-deacetylated P53 peptide-3'-O-acetyl ADP ribose · 3OD B253 · binds GLY21, ALA22, GLY23, THR26, PRO27, ASP32, PHE33, ARG34 and 18 more

Residues it binds most

GLY 2, ALA 2, ASN 2, ASP 2, LEU 2, PHE 2, SER 2, VAL 2, ARG 2, GLN 2 (residue and the binding sites it lines).

Found with

  • APR · Adenosine-5-diphosphoribose
  • ZN · Zinc ion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.