GL1X · GenesisL1 explorer

Ligand · 38V

38V · [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3-[[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-4-oxidanyl-oxolan-2-yl]methoxy-[[oxidanyl(phosphonooxy)phosphoryl]methyl]phosphinic acid

38V, [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3-[[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-4-oxidanyl-oxolan-2-yl]methoxy-[[oxidanyl(phosphonooxy)phosphoryl]methyl]pho…

Component
38V
Formula
C21 H30 N10 O19 P4
Class
ligand
Structures
2
PDB entries
1

Binding sites

38V in 2 structures; the first of them:

  • 4TY0 · Crystal structure of Vibrio cholerae DncV cyclic AMP-GMP synthase in complex with linear… · 38V A503 · binds GLN113, GLY114, SER115, TYR118, ASP132, ASP134, LYS178, THR180 and 18 more
  • 4TY0 · Crystal structure of vibrio cholerae dncv cyclic AMP-gmp synthase in complex with linear… · 38V A503 · binds GLN113, GLY114, SER115, TYR118, ASP132, ASP134, LYS178, THR180 and 18 more

Residues it binds most

ASP 4, SER 4, ARG 4, LEU 4, LYS 4, PRO 4, TYR 4, THR 4, CYS 4, GLN 4 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ACT · Acetate ion

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