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Ligand · 2RW

2RW · [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3S)-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate

2RW, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3S)-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate (C15 H23 N5 O12 P2, 527.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2…

Component
2RW
Formula
C15 H23 N5 O12 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

2RW in 2 structures; the first of them:

  • 4O9M · Human DNA polymerase beta complexed with adenylated tetrahydrofuran (abasic site)… · 2RW D0 · binds DG1, DT2, LYS35, LYS68, GLU71, LYS72, LYS84
  • 4O9M · Human DNA polymerase beta complexed with adenylated tetrahydrofuran (abasic site)… · 2RW D0 · binds DG1, DT2, LYS35, LYS68, GLU71, LYS72, LYS84

Residues it binds most

LYS 2, DG 2, DT 2, GLU 2 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion

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