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Ligand · 2RA

2RA · 3-amino-D-alanine

2RA, 3-amino-D-alanine (C3 H8 N2 O2, 104.1 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
2RA
Formula
C3 H8 N2 O2
Class
ligand
Structures
6
PDB entries
3

Binding sites

2RA in 6 structures; the first of them:

  • 3ANV · Crystal structure of D-serine dehydratase from chicken kidney (2,3-DAP complex) · 2RA A455 · binds LYS45, ARG143, HIS176, HIS347
  • 3PYL · Crystal structure of aspartate beta-semialdehide dehydrogenase from Streptococcus… · 2RA A367 · binds ASN127, CYS128, GLN155, GLY159, ALA160, ILE209, GLU220, ARG245 and 1 more
  • 3PZB · Crystals Structure of Aspartate beta-Semialdehyde Dehydrogenase complex with NADP and… · 2RA A367 · binds ASN127, CYS128, GLN155, GLY159, ALA160, ILE209, GLU220, ARG245 and 1 more
  • 3ANV · Crystal structure of D-serine dehydratase from chicken kidney (2,3-dap complex) · 2RA A455 · binds LYS45, ARG143, HIS176, HIS347
  • 3PYL · Crystal structure of aspartate beta-semialdehide dehydrogenase from streptococcus… · 2RA A367 · binds ASN127, CYS128, GLN155, GLY159, ALA160, ILE209, GLU220, ARG245 and 1 more
  • 3PZB · Crystals structure of aspartate beta-semialdehyde dehydrogenase complex with NADP and… · 2RA A367 · binds ASN127, CYS128, GLN155, GLY159, ALA160, ILE209, GLU220, ARG245 and 1 more

Residues it binds most

HIS 12, ARG 12, ALA 10, ASN 10, CYS 10, GLN 10, GLU 10, GLY 10, ILE 10, LYS 4 (residue and the binding sites it lines).

Found with

  • NAP · Nadp nicotinamide-adenine-dinucleotide phosphate
  • PLP · Pyridoxal-5'-phosphate
  • NA · Sodium ion
  • ZN · Zinc ion
  • CL · Chloride ion
  • EDO · 1,2-ethanediol

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