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Ligand · 2H5

2H5 · 3-deoxy-3-fluoro-beta-D-galactopyranose

2H5, 3-deoxy-3-fluoro-beta-D-galactopyranose (C6 H11 F O5, 182.2 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
2H5
Formula
C6 H11 F O5
Class
sugar
Structures
6
PDB entries
3

Binding sites

2H5 in 6 structures; the first of them:

  • 4MOM · Pyranose 2-oxidase H450G mutant with 3-fluorinated galactose · 2H5 A802 · binds THR169, ALA171, LEU361, GLN448, ASP452, PHE454, TYR456, ARG472 and 6 more
  • 4MOP · Pyranose 2-oxidase V546C mutant with 3-fluorinated galactose · 2H5 A802 · binds THR169, ALA171, LEU361, GLN448, ASP452, PHE454, TYR456, ARG472 and 6 more
  • 4MOR · Pyranose 2-oxidase H450G/V546C double mutant with 3-fluorinated galactose · 2H5 A802 · binds THR169, ALA171, LEU361, GLN448, ASP452, PHE454, TYR456, ARG472 and 6 more
  • 4MOM · Pyranose 2-oxidase H450G mutant with 3-fluorinated galactose · 2H5 A802 · binds THR169, ALA171, LEU361, GLN448, ASP452, PHE454, TYR456, ARG472 and 6 more
  • 4MOP · Pyranose 2-oxidase V546C mutant with 3-fluorinated galactose · 2H5 A802 · binds THR169, ALA171, LEU361, GLN448, ASP452, PHE454, TYR456, ARG472 and 6 more
  • 4MOR · Pyranose 2-oxidase H450G/V546C double mutant with 3-fluorinated galactose · 2H5 A802 · binds THR169, ALA171, LEU361, GLN448, ASP452, PHE454, TYR456, ARG472 and 6 more

Residues it binds most

LEU 24, PHE 24, HIS 24, ARG 24, ASN 24, ASP 24, GLN 24, THR 24, TYR 24, ALA 18 (residue and the binding sites it lines).

Found with

  • FDA · Dihydroflavine-adenine dinucleotide
  • MES · 2-(N-morpholino)-ethanesulfonic acid
  • 12P · Dodecaethylene glycol
  • 1PE · Pentaethylene glycol

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