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Ligand · 2E6

2E6 · pyridin-2-ylmethyl trihydrogen diphosphate

2E6, pyridin-2-ylmethyl trihydrogen diphosphate (C6 H9 N O7 P2, 269.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
2E6
Formula
C6 H9 N O7 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

2E6 in 2 structures; the first of them:

  • 4MV0 · IspH in complex with pyridin-2-ylmethyl diphosphate · 2E6 A402 · binds VAL15, VAL40, HIS41, ALA73, HIS74, VAL99, HIS124, GLU126 and 8 more
  • 4MV0 · Isph in complex with pyridin-2-ylmethyl diphosphate · 2E6 A402 · binds VAL15, VAL40, HIS41, ALA73, HIS74, VAL99, HIS124, GLU126 and 8 more

Residues it binds most

HIS 4, SER 4, VAL 4, ALA 4, ASN 4, THR 4, GLU 4 (residue and the binding sites it lines).

Found with

  • F3S · FE3-S4 cluster

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