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Ligand · 2B8

2B8 · (5R)-5-(3-aminopropyl)-1-propyl-4,5,6,7-tetrahydro-1H-benzimidazole-5-carboxylic acid

2B8, (5R)-5-(3-aminopropyl)-1-propyl-4,5,6,7-tetrahydro-1H-benzimidazole-5-carboxylic acid (C14 H23 N3 O2, 265.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within…

Component
2B8
Formula
C14 H23 N3 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

2B8 in 2 structures; the first of them:

  • 4P10 · pro-carboxypeptidase U In Complex With 5-(3-aminopropyl)-1-propyl-6,7-dihydro-4H-benzimida… · 2B8 A501 · binds TRP54, GLN55, HIS181, GLU184, ARG239, ASN256, ARG257, HIS310 and 10 more
  • 4P10 · Pro-carboxypeptidase U in complex with 5-(3-aminopropyl)-1-propyl-6,7… · 2B8 A501 · binds TRP54, GLN55, HIS181, GLU184, ARG239, ASN256, ARG257, HIS310 and 10 more

Residues it binds most

ARG 2, GLU 2, HIS 2, SER 2, ALA 2, ASN 2, ASP 2, GLN 2, GLY 2, LEU 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • DMS · Dimethyl sulfoxide

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