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Ligand · 25A

25A · 5'-O-monophosphoryladenylyl(2'->5')adenylyl(2'->5') adenosine

25A, 5'-O-monophosphoryladenylyl(2'->5')adenylyl(2'->5') adenosine (C30 H38 N15 O19 P3, 1005.6 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the…

Component
25A
Formula
C30 H38 N15 O19 P3
Class
ligand
Structures
4
PDB entries
3

Binding sites

25A in 4 structures; the first of them:

  • 7DSY · Crystal Structure of RNase L in complex with KM05073 · 25A a801 · binds GLN32, GLU53, TRP56, TRP58, SER63, GLN66, LYS87, ASN89 and 14 more
  • 6M11 · Crystal structure of RNase L in complex with sunitinib · 25A a1000 · binds GLN32, TRP56, TRP58, SER63, GLN66, LYS87, ASN89, ILE99 and 12 more
  • 7DSY · Crystal structure of RNase L in complex with KM05073 · 25A a801 · binds GLN32, GLU53, TRP56, TRP58, SER63, GLN66, LYS87, ASN89 and 14 more
  • 7DTS · Crystal structure of RNase L in complex with AC40357 · 25A a801 · binds GLN32, TRP56, TRP58, SER63, GLN66, LYS87, ASN89, ILE99 and 13 more

Residues it binds most

ARG 8, ASN 8, PHE 8, TRP 8, TYR 8, GLN 8, GLU 8, LYS 8, ASP 8, SER 8 (residue and the binding sites it lines).

Found with

  • PO4 · Phosphate ion
  • HFX · 1-chloranyl-3-methylsulfinyl-6,7-dihydro-5H-2-benzothiophen-4-one
  • 27K · Butyl 4-hydroxybenzoate
  • B49 · N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide

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