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Ligand · 23Y

23Y · (2S,3S)-3-(3,5-dihydroxyphenyl)-2-(4-hydroxyphenyl)-4-[(E)-2-(4-hydroxyphenyl)ethenyl]-2,3-dihydro-1-benzofuran-6-yl beta-D-glucopyranoside

23Y, (2S,3S)-3-(3,5-dihydroxyphenyl)-2-(4-hydroxyphenyl)-4-[(E)-2-(4-hydroxyphenyl)ethenyl]-2,3-dihydro-1-benzofuran-6-yl beta-D-glucopyranoside (C34 H32 O11, 616.6 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB…

Component
23Y
Formula
C34 H32 O11
Class
ligand
Structures
4
PDB entries
2

Binding sites

23Y in 4 structures; the first of them:

  • 2M9R · 3D NMR structure of a complex between the amyloid beta peptide (1-40) and the polyphenol… · 23Y A101 · binds TYR10, VAL12, GLN15, PHE19
  • 2M9S · 3D NMR structure of a complex between the amyloid beta peptide (1-40) and the polyphenol… · 23Y A101 · binds GLY9, TYR10, GLU11, VAL12, HIS13, GLN15, PHE19
  • 2M9R · 3D NMR structure of a complex between the amyloid beta peptide (1-40) and the polyphenol… · 23Y A101 · binds TYR10, VAL12, GLN15, PHE19
  • 2M9S · 3D NMR structure of a complex between the amyloid beta peptide (1-40) and the polyphenol… · 23Y A101 · binds GLY9, TYR10, GLU11, VAL12, HIS13, GLN15, PHE19

Residues it binds most

GLN 4, GLY 4, LYS 4, PHE 4, TYR 4, VAL 4, GLU 2, HIS 2, SER 2 (residue and the binding sites it lines).

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