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Ligand · 210

210 · Pamidronate

210, Pamidronate (C3 H11 N O7 P2, 235.1 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
210
Formula
C3 H11 N O7 P2
Class
ligand
Structures
5
PDB entries
4

Binding sites

210 in 5 structures; the first of them:

  • 5ERM · Crystal structure of cyclization domain of Phomopsis amygdali fusicoccadiene synthase… · 210 A401 · binds PHE89, ASP92, ASP96, ARG188, ASP191, VAL192, ASN232, SER236 and 4 more
  • 5ERO · Crystal structure of elongation domain of Phomopsis amygdali fusicoccadiene synthase… · 210 A804 · binds LEU471, ASP474, ASP478, ARG483, LYS561, GLN602, ASP605, LYS619 and 1 more
  • 7KJ8 · Wild-type epi-isozizaene synthase: complex with 3 Mg2+ and pamidronate · 210 A405 · binds PHE96, ASP99, TYR172, ARG194, PHE198, ASN240, SER244, LYS247 and 3 more
  • 8SU1 · F96H epi-Isozizaene Synthase: complex with 3 Mg2+ and pamidronate · 210 A405 · binds PHE95, HIS96, ASP99, ARG194, THR197, PHE198, ASN240, SER244 and 4 more
  • 7KJ8 · Wild-type epi-isozizaene synthase: complex with 3 MG2+ and pamidronate · 210 A405 · binds PHE96, ASP99, ARG194, ASN240, SER244, LYS247, GLU248, ARG338 and 1 more

Residues it binds most

ASP 8, LYS 8, ARG 8, PHE 5, TYR 5, ASN 5, GLU 5, SER 5, GLN 3, VAL 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • SO4 · Sulfate ion
  • CO · Cobalt (II) ion
  • CL · Chloride ion

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