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Ligand · 1W9

1W9 · (2R)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-oxidanyl-propanoic acid

1W9, (2R)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-oxidanyl-propanoic acid (C11 H15 N2 O8 P, 334.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding…

Component
1W9
Formula
C11 H15 N2 O8 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

1W9 in 2 structures; the first of them:

  • 4OYT · Crystal structure of ternary complex of Plasmodium vivax SHMT with D-serine and folinic… · 1W9 A501 · binds SER34, SER100, GLY101, SER102, ASN105, HIS129, HIS132, TYR182 and 14 more
  • 4OYT · Crystal structure of ternary complex of plasmodium vivax shmt with D- serine and folinic… · 1W9 A501 · binds SER34, SER100, GLY101, SER102, ASN105, HIS129, HIS132, TYR182 and 14 more

Residues it binds most

HIS 6, SER 6, GLY 6, THR 6, TYR 6, ARG 6, ASN 6, ASP 6, LYS 6, GLU 4 (residue and the binding sites it lines).

Found with

  • FON · N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid
  • ETF · Trifluoroethanol
  • GOL · Glycerol
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol

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