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Ligand · 1VY

1VY · 1-deoxy-1-(7-hydroxy-6-methyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol

1VY, 1-deoxy-1-(7-hydroxy-6-methyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol (C12 H16 N4 O7, 328.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5…

Component
1VY
Formula
C12 H16 N4 O7
Class
ligand
Structures
4
PDB entries
2

Binding sites

1VY in 4 structures; the first of them:

  • 4L4V · Structure of human MAIT TCR in complex with human MR1-RL-6-Me-7-OH · 1VY A301 · binds TYR7, PHE8, ARG9, SER24, THR34, LYS43, HIS58, TYR62 and 10 more
  • 4LCW · The structure of human MAIT TCR in complex with MR1-K43A-RL-6-Me-7OH · 1VY A302 · binds TYR7, ARG9, SER24, THR34, HIS58, TYR62, LEU66, TRP69 and 8 more
  • 4L4V · Structure of human mait TCR in complex with human MR1-rl-6-me-7-oh · 1VY A301 · binds TYR7, PHE8, ARG9, SER24, THR34, LYS43, HIS58, TYR62 and 10 more
  • 4LCW · The structure of human mait TCR in complex with MR1-K43A-rl-6-me-7OH · 1VY A302 · binds TYR7, ARG9, SER24, THR34, HIS58, TYR62, LEU66, TRP69 and 8 more

Residues it binds most

TYR 8, TRP 8, ARG 8, GLN 8, GLY 8, HIS 8, ILE 8, LEU 8, SER 8, THR 8 (residue and the binding sites it lines).

Found with

  • GOL · Glycerol

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