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Ligand · 1L2

1L2 · (2S)-3-(alpha-D-galactopyranosyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl (9Z,12Z)-octadeca-9,12-dienoate

1L2, (2S)-3-(alpha-D-galactopyranosyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl (9Z,12Z)-octadeca-9,12-dienoate (C45 H80 O10, 781.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
1L2
Formula
C45 H80 O10
Class
ligand
Structures
2
PDB entries
1

Binding sites

1L2 in 2 structures; the first of them:

  • 3ILP · Structure of mCD1d with bound glycolipid BbGL-2f from Borrelia burgdorferi · 1L2 A286 · binds PHE10, CYS12, GLN14, SER28, VAL30, HIS38, TRP40, ILE47 and 34 more
  • 3ILP · Structure of MCD1D with bound glycolipid bbgl-2F from borrelia burgdorferi · 1L2 A286 · binds PHE10, CYS12, GLN14, SER28, VAL30, HIS38, TRP40, ILE47 and 34 more

Residues it binds most

VAL 2, LEU 2, ILE 2, PHE 2, TRP 2, ASP 2, SER 2, THR 2, ALA 2, ARG 2 (residue and the binding sites it lines).

Found with

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • DMS · Dimethyl sulfoxide

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