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Ligand · 1DM

1DM · N-(2-morpholin-4-yl-1-morpholin-4-ylmethyl-ethyl)-3-nitro-5-(3,4,5-trihydroxy-6-hydroxymethyl-tetrahydro-pyran-2-yloxy)-benzamide

1DM, N-(2-morpholin-4-yl-1-morpholin-4-ylmethyl-ethyl)-3-nitro-5-(3,4,5-trihydroxy-6-hydroxymethyl-tetrahydro-pyran-2-yloxy)-benzamide (C24 H36 N4 O11, 556.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry).…

Component
1DM
Formula
C24 H36 N4 O11
Class
ligand
Structures
2
PDB entries
1

Binding sites

1DM in 2 structures; the first of them:

  • 1PZI · Heat-Labile Enterotoxin B-Pentamer Complexed With Nitrophenyl Galactoside 2a · 1DM D104 · binds TYR12, GLU51, GLN56, HIS57, GLN61, TRP88, ASN90, LYS91 and 2 more
  • 1PZI · Heat-labile enterotoxin B-pentamer complexed with nitrophenyl galactoside 2A · 1DM D104 · binds TYR12, GLU51, GLN56, HIS57, GLN61, TRP88, ASN90, LYS91 and 2 more

Residues it binds most

GLN 10, GLU 10, ALA 10, ASN 10, GLY 10, HIS 10, LYS 10, TRP 10, TYR 10, ARG 6 (residue and the binding sites it lines).

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