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Ligand · 19D

19D · (1R,2R,3R,4R,5R,7R)-2-(acetylamino)-7-[(1R)-1,2-dihydroxyethyl]-4-fluoro-3-hydroxy-6,8-dioxabicyclo[3.2.1]octane-5-carboxylic acid

19D, (1R,2R,3R,4R,5R,7R)-2-(acetylamino)-7-[(1R)-1,2-dihydroxyethyl]-4-fluoro-3-hydroxy-6,8-dioxabicyclo[3.2.1]octane-5-carboxylic acid (C11 H16 F N O8, 309.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry).…

Component
19D
Formula
C11 H16 F N O8
Class
ligand
Structures
2
PDB entries
1

Binding sites

19D in 2 structures; the first of them:

  • 4XJU · Crystal structure of the NanB sialidase from streptococcus pneumoniae in complex with… · 19D A706 · binds ARG245, ILE246, ARG264, ASP270, ILE326, ASP327, ASP344, MET346 and 10 more
  • 4XJU · Crystal structure of the nanb sialidase from streptococcus pneumoniae in complex with… · 19D A706 · binds ARG245, ILE246, ARG264, ASP270, ILE326, ASP327, ASP344, MET346 and 10 more

Residues it binds most

ARG 2, ASP 2, TYR 2, ILE 2, ASN 2, GLU 2, MET 2, SER 2, THR 2, TRP 2 (residue and the binding sites it lines).

Found with

  • PO4 · Phosphate ion
  • DMS · Dimethyl sulfoxide

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