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Ligand · 12B

12B · Benzo[cd]indol-2(1H)-one

12B, Benzo[cd]indol-2(1H)-one (C11 H7 N O, 169.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
12B
Formula
C11 H7 N O
Class
ligand
Structures
2
PDB entries
1

Binding sites

12B in 2 structures; the first of them:

  • 2F67 · Crystal structure of Nucleoside 2-deoxyribosyltransferase from Trypanosoma brucei at 1.6… · 12B A382 · binds GLU127, PHE129, ASN134, LEU135, MSE136, VAL19, PHE20, PRO46 and 4 more
  • 2F67 · Crystal structure of nucleoside 2-deoxyribosyltransferase from trypanosoma brucei at 1.6… · 12B A382 · binds GLU127, PHE129, ASN134, LEU135, MSE136, VAL19, PHE20, PRO46 and 4 more

Residues it binds most

ASN 4, GLU 4, PHE 4, ILE 4, LEU 4, MSE 4, PRO 4, THR 4, VAL 4 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • GOL · Glycerol

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