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Ligand · 0Y0

0Y0 · 5'-{[(3S)-3-amino-3-carboxypropyl]amino}-5'-deoxyadenosine

0Y0, 5'-{[(3S)-3-amino-3-carboxypropyl]amino}-5'-deoxyadenosine (C14 H21 N7 O5, 367.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
0Y0
Formula
C14 H21 N7 O5
Class
ligand
Structures
4
PDB entries
2

Binding sites

0Y0 in 4 structures; the first of them:

  • 4GOM · Crystal Structure of E. coli DNA Adenine Methyltransferase in Complex with Aza-SAM · 0Y0 D301 · binds TRP10, ALA11, PRO34, PHE35, GLY37, ASP54, ILE55, ASN56 and 9 more
  • 7P9O · Structure of E.coli RlmJ in complex with a SAM analogue (CA) · 0Y0 A301 · binds LYS18, HIS19, ASP40, THR41, HIS42, ALA43, GLY44, TYR48 and 14 more
  • 4GOM · Crystal structure of E. COLI DNA adenine methyltransferase in complex with aza-SAM · 0Y0 D301 · binds TRP10, ALA11, PRO34, PHE35, GLY37, ASP54, ILE55, ASN56 and 9 more
  • 7P9O · Structure of E.COLI rlmj in complex with a SAM analogue (ca) · 0Y0 A301 · binds LYS18, HIS19, ASP40, THR41, HIS42, ALA43, GLY44, TYR48 and 14 more

Residues it binds most

ASP 8, PRO 8, GLY 8, PHE 8, TYR 8, ALA 8, GLU 8, SER 8, ASN 6, GLN 6 (residue and the binding sites it lines).

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