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Ligand · 0SH

0SH · N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]hexadecanamide

0SH, N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]hexadecanamide (C40 H79 N O9, 718.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within…

Component
0SH
Formula
C40 H79 N O9
Class
ligand
Structures
2
PDB entries
1

Binding sites

0SH in 2 structures; the first of them:

  • 4F7E · Crystal structure of bovine CD1d with bound C16:0-alpha-galactosyl ceramide · 0SH A301 · binds GLY12, LEU13, GLN14, GLY28, LEU29, ALA30, TYR38, TRP40 and 31 more
  • 4F7E · Crystal structure of bovine CD1D with bound C16:0-alpha-galactosyl ceramide · 0SH A301 · binds GLY12, LEU13, GLN14, GLY28, LEU29, ALA30, TYR38, TRP40 and 31 more

Residues it binds most

LEU 2, ILE 2, VAL 2, PHE 2, THR 2, ALA 2, GLY 2, TRP 2, TYR 2, ARG 2 (residue and the binding sites it lines).

Found with

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • SO4 · Sulfate ion

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