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Ligand · 0SG

0SG · N-{(2S,3R,4E)-1-[(3,6-di-O-sulfo-beta-D-galactopyranosyl)oxy]-3-hydroxyoctadec-4-en-2-yl}dodecanamide

0SG, N-{(2S,3R,4E)-1-[(3,6-di-O-sulfo-beta-D-galactopyranosyl)oxy]-3-hydroxyoctadec-4-en-2-yl}dodecanamide (C36 H69 N O14 S2, 804.1 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (5 PDB entries). Every binding site with…

Component
0SG
Formula
C36 H69 N O14 S2
Class
ligand
Structures
10
PDB entries
5

Binding sites

0SG in 10 structures; the first of them:

  • 4F7C · Crystal structure of bovine CD1d with bound C12-di-sulfatide · 0SG A306 · binds GLY12, LEU13, GLN14, GLY28, THR69, LEU70, VAL72, TYR73 and 22 more
  • 4GHS · Crystal structure of human GLTP bound with 12:0 disulfatide (orthorombic form; two… · 0SG A301 · binds PHE34, LEU37, PHE42, ILE45, ASP48, GLY51, ASN52, LYS55 and 26 more
  • 4GIX · Crystal structure of human GLTP bound with 12:0 disulfatide · 0SG A301 · binds PHE34, PHE42, PRO44, ILE45, ASP48, ILE49, GLY51, ASN52 and 15 more
  • 4GVT · Crystal structure of D48V mutant of human GLTP bound with 12:0 disulfatide (hexagonal… · 0SG A301 · binds PHE34, LEU37, PHE42, ILE45, VAL48, ILE49, GLY51, ASN52 and 16 more
  • 4GXD · Crystal structure of D48V mutant of human GLTP bound with 12:0 disulfatide · 0SG A301 · binds PHE34, PHE42, ILE45, VAL48, ILE49, GLY51, ASN52, LYS55 and 14 more
  • 4F7C · Crystal structure of bovine CD1D with bound C12-di-sulfatide · 0SG A306 · binds GLY12, LEU13, GLN14, GLY28, THR69, LEU70, VAL72, TYR73 and 22 more
  • 4GHS · Crystal structure of human gltp bound with 12:0 disulfatide (orthorombic form; two… · 0SG A301 · binds PHE34, LEU37, PHE42, ILE45, ASP48, GLY51, ASN52, LYS55 and 26 more
  • 4GIX · Crystal structure of human gltp bound with 12:0 disulfatide · 0SG A301 · binds PHE34, PHE42, PRO44, ILE45, ASP48, ILE49, GLY51, ASN52 and 15 more
  • 4GVT · Crystal structure of D48V mutant of human gltp bound with 12:0 disulfatide (hexagonal… · 0SG A301 · binds PHE34, LEU37, PHE42, ILE45, VAL48, ILE49, GLY51, ASN52 and 16 more
  • 4GXD · Crystal structure of D48V mutant of human gltp bound with 12:0 disulfatide · 0SG A301 · binds PHE34, PHE42, ILE45, VAL48, ILE49, GLY51, ASN52, LYS55 and 14 more

Residues it binds most

PHE 14, LEU 14, ILE 14, VAL 14, GLY 14, ALA 10, LYS 10, THR 4, ASN 14, HIS 10 (residue and the binding sites it lines).

Found with

  • BMA · beta-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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