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Ligand · 0P5

0P5 · 4-{4-[(1H-benzimidazol-2-ylmethyl)amino]-6-(2-chloro-4-methoxyphenoxy)pyrimidin-2-yl}piperazin-2-one

0P5, 4-{4-[(1H-benzimidazol-2-ylmethyl)amino]-6-(2-chloro-4-methoxyphenoxy)pyrimidin-2-yl}piperazin-2-one (C23 H22 Cl N7 O3, 479.9 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
0P5
Formula
C23 H22 Cl N7 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

0P5 in 2 structures; the first of them:

  • 4EG6 · Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor Chem 1325 · 0P5 B906 · binds PRO247, ILE248, TYR250, ASP287, HIS289, GLY290, GLU368, LEU456 and 12 more
  • 4EG6 · Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor chem 1325 · 0P5 B906 · binds PRO247, ILE248, TYR250, ASP287, HIS289, GLY290, GLU368, LEU456 and 12 more

Residues it binds most

TYR 2, ASP 2, HIS 2, ILE 2, LEU 2, VAL 2, ALA 2, ASN 2, GLU 2, GLY 2 (residue and the binding sites it lines).

Found with

  • MET · Methionine
  • SO4 · Sulfate ion
  • DMS · Dimethyl sulfoxide
  • GOL · Glycerol

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