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Ligand · 0OV

0OV · [4-amino-2-{[(1S,2R)-2-methylcyclohexyl]oxy}-5-oxopyrido[2,3-d]pyrimidin-8(5H)-yl]acetonitrile

0OV, [4-amino-2-{[(1S,2R)-2-methylcyclohexyl]oxy}-5-oxopyrido[2,3-d]pyrimidin-8(5H)-yl]acetonitrile (C16 H19 N5 O2, 313.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues…

Component
0OV
Formula
C16 H19 N5 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

0OV in 2 structures; the first of them:

  • 4EFE · crystal structure of DNA ligase · 0OV A404 · binds TYR87, SER88, LEU89, GLU118, LEU119, LYS120, ILE121, ALA125 and 8 more
  • 4EFE · Crystal structure of DNA ligase · 0OV A404 · binds TYR87, SER88, LEU89, GLU118, LEU119, LYS120, ILE121, ALA125 and 8 more

Residues it binds most

ALA 2, GLU 2, LEU 2, LYS 2, TYR 2, ILE 2, PRO 2, SER 2, THR 2, TRP 2 (residue and the binding sites it lines).

Found with

  • NMN · Beta-nicotinamide ribose monophosphate
  • SO4 · Sulfate ion

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