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Ligand · 0O3

0O3 · 3-(hydroxymethyl)but-3-en-1-yl trihydrogen diphosphate

0O3, 3-(hydroxymethyl)but-3-en-1-yl trihydrogen diphosphate (C5 H12 O8 P2, 262.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
0O3
Formula
C5 H12 O8 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

0O3 in 2 structures; the first of them:

  • 4EB3 · Crystal structure of IspH in complex with iso-HMBPP · 0O3 A402 · binds VAL15, VAL40, HIS41, ALA73, HIS74, VAL99, HIS124, GLU126 and 8 more
  • 4EB3 · Crystal structure of isph in complex with iso-hmbpp · 0O3 A402 · binds VAL15, VAL40, HIS41, ALA73, HIS74, VAL99, HIS124, GLU126 and 8 more

Residues it binds most

HIS 4, SER 4, VAL 4, ALA 4, ASN 4, THR 4, GLU 4 (residue and the binding sites it lines).

Found with

  • SF4 · Iron/sulfur cluster

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