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Ligand · 0NP

0NP · 2',3'-dideoxy-2'-fluoro-3'-triaza-1,2-dien-2-ium-1-yluridine

0NP, 2',3'-dideoxy-2'-fluoro-3'-triaza-1,2-dien-2-ium-1-yluridine (C9 H11 F N5 O4 +1, 272.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it…

Component
0NP
Formula
C9 H11 F N5 O4 +1
Class
ligand
Structures
2
PDB entries
1

Binding sites

0NP in 2 structures; the first of them:

  • 4EAD · Thymidine phosphorylase from E.coli with 3'-azido-2'-fluoro-dideoxyuridine · 0NP A501 · binds THR87, LEU117, ASP164, TYR168, ARG171, VAL177, ILE183, SER186 and 5 more
  • 4EAD · Thymidine phosphorylase from E.COLI with 3'-azido-2'-fluoro- dideoxyuridine · 0NP A501 · binds THR87, LEU117, ASP164, TYR168, ARG171, VAL177, ILE183, SER186 and 5 more

Residues it binds most

ILE 2, LEU 2, ARG 2, ASP 2, LYS 2, MET 2, PHE 2, SER 2, THR 2, TYR 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • GOL · Glycerol

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