GL1X · GenesisL1 explorer

Ligand · 0L7

0L7 · 2-amino-5-(5-aminopent-1-yn-1-yl)-7-{2-deoxy-5-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one

0L7, 2-amino-5-(5-aminopent-1-yn-1-yl)-7-{2-deoxy-5-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one (C16 H24 N5 O13 P3, 587.3 g/mol), in the…

Component
0L7
Formula
C16 H24 N5 O13 P3
Class
ligand
Structures
2
PDB entries
1

Binding sites

0L7 in 2 structures; the first of them:

  • 4DFP · Crystal structure of the large fragment of DNA Polymerase I from Thermus aqauticus in a… · 0L7 A908 · binds ARG573, ASP610, TYR611, SER612, GLN613, ILE614, GLU615, HIS639 and 11 more
  • 4DFP · Crystal structure of the large fragment of DNA polymerase I from thermus aqauticus in a… · 0L7 A908 · binds ARG573, ASP610, TYR611, SER612, GLN613, ILE614, GLU615, HIS639 and 11 more

Residues it binds most

ARG 2, ASP 2, TYR 2, ASN 2, DC 2, DG 2, DOC 2, GLN 2, GLU 2, HIS 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • EDO · 1,2-ethanediol
  • FMT · Formic acid

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