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Ligand · 0HQ

0HQ · Diazomethane

0HQ, Diazomethane (C H2 N2, 42.0 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
0HQ
Formula
C H2 N2
Class
ligand
Structures
3
PDB entries
3

Binding sites

0HQ in 3 structures; the first of them:

  • 1GEC · Glycyl endopeptidase-complex with benzyloxycarbonyl-leucine-valine- glycine-methylene… · 0HQ I5 · binds GLN19, GLU23, SER24, CYS25, TRP26, HIS159, VAL3, GLY4
  • 1KHP · Monoclinic form of PAPAIN/ZLFG-dam covalent complex · 0HQ I254 · binds CYS25, ASP158, HIS159, ALA160, PHE252, GLY253
  • 1KHQ · Orthorhombic form of PAPAIN/ZLFG-dam covalent complex · 0HQ I254 · binds CYS25, ASP158, HIS159, ALA160, PHE252, GLY253

Residues it binds most

CYS 3, GLY 3, HIS 3, ALA 2, ASP 2, PHE 2, GLN 1, GLU 1, SER 1, TRP 1 (residue and the binding sites it lines).

Found with

  • PHQ · benzyl chlorocarbonate

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