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Ligand · 09Y

09Y · 5-hydroxy-N-[2-(2-methoxypyridin-4-yl)ethyl]-2-(2-methylphenyl)-6-oxo-1,6-dihydropyrimidine-4-carboxamide

09Y, 5-hydroxy-N-[2-(2-methoxypyridin-4-yl)ethyl]-2-(2-methylphenyl)-6-oxo-1,6-dihydropyrimidine-4-carboxamide (C20 H20 N4 O4, 380.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with…

Component
09Y
Formula
C20 H20 N4 O4
Class
ligand
Structures
4
PDB entries
2

Binding sites

09Y in 4 structures; the first of them:

  • 7N47 · The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with… · 09Y A207 · binds ALA20, TYR24, LYS34, ILE38, HIS41, GLU80, LEU106, ASP108 and 3 more
  • 7N55 · The crystal structure of the mutant I38T PA endonuclease (2009/H1N1/CALIFORNIA) in… · 09Y A207 · binds ALA20, TYR24, LYS34, THR38, HIS41, GLU80, LEU106, ASP108 and 4 more
  • 7N47 · The crystal structure of wild type pa endonuclease (2009/H1N1/CALIFORNIA) in complex with… · 09Y A207 · binds ALA20, TYR24, LYS34, ILE38, HIS41, GLU80, LEU106, ASP108 and 3 more
  • 7N55 · The crystal structure of the mutant I38T pa endonuclease (2009/H1N1/CALIFORNIA) in… · 09Y A207 · binds TYR24, LYS34, HIS41, GLU80, ASP108, GLU119, ILE120, TYR130

Residues it binds most

GLU 4, TYR 4, ILE 4, ASP 4, HIS 4, LYS 4, ALA 3, LEU 3, GLY 1, THR 1 (residue and the binding sites it lines).

Found with

  • QQ4 · Hexa Vinylpyrrolidone K15
  • MN · Manganese (II) ion
  • SO4 · Sulfate ion

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