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Ligand · 07V

07V · (5R)-2-methyl-5-(prop-1-en-2-yl)cyclohex-2-en-1-one

07V, (5R)-2-methyl-5-(prop-1-en-2-yl)cyclohex-2-en-1-one (C10 H14 O, 150.2 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
07V
Formula
C10 H14 O
Class
ligand
Structures
8
PDB entries
4

Binding sites

07V in 8 structures; the first of them:

  • 3TXZ · OYE1-W116Q complexed with R-carvone · 07V A402 · binds THR37, MET39, TYR82, GLN116, HIS191, ASN194, TYR196, PHE250 and 3 more
  • 4GWE · W116L-OYE1 complexed with (R)-carvone · 07V A409 · binds THR37, LEU116, HIS191, ASN194, TYR196, PHE250, PRO295, PHE296 and 1 more
  • 4K7V · OYE1-W116A complexed with (R)-carvone · 07V A404 · binds THR37, GLY72, PHE74, TYR82, ALA85, ALA116, LEU118, HIS191 and 6 more
  • 4K8H · OYE1-W116V complexed with (R)-carvone · 07V A404 · binds THR37, MET39, GLY72, TYR82, VAL116, LEU118, HIS191, ASN194 and 5 more
  • 3TXZ · OYE1-W116Q complexed with R-carvone · 07V A402 · binds THR37, MET39, TYR82, GLN116, HIS191, ASN194, TYR196, PHE250 and 3 more
  • 4GWE · W116L-OYE1 complexed with (R)-carvone · 07V A409 · binds THR37, LEU116, HIS191, ASN194, TYR196, PHE250, PRO295, PHE296 and 1 more
  • 4K7V · OYE1-W116A complexed with (R)-carvone · 07V A404 · binds THR37, GLY72, PHE74, TYR82, ALA85, ALA116, LEU118, HIS191 and 6 more
  • 4K8H · OYE1-W116V complexed with (R)-carvone · 07V A404 · binds THR37, MET39, GLY72, TYR82, VAL116, LEU118, HIS191, ASN194 and 5 more

Residues it binds most

TYR 8, PHE 8, ASN 8, HIS 8, PRO 8, THR 8, LEU 6, ALA 2, GLY 4, MET 4 (residue and the binding sites it lines).

Found with

  • FMN · Flavin mononucleotide
  • MG · Magnesium ion
  • NA · Sodium ion
  • CL · Chloride ion
  • 1PE · Pentaethylene glycol
  • PGE · Triethylene glycol

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